Core Facility Flow Cytometry BMC

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The instruments and services of the CFFlowCyt at BMC contributed to the following publications (list not exhaustive): 


  • Schmidt et al.: Complex human adenoid tissue-based ex vivo culture systems reveal anti-inflammatory drug effects on germinal center T and B cells.
    EBioMedicine. 2020 Feb; 53 102684; doi: 10.1016/j.ebiom.2020.102684; PMID:  
  • Zeiträg et al.: Gene dose matters: Considerations for the use of inducible CD4‐CreERT2 mouse lines.
    Eur J Immunol. 2020 Feb 20; doi: 10.1002/eji.201948461; PMID: 32087088
  • Huber et al.: Fingolimod Profoundly Reduces Frequencies and Alters Subset Composition of Circulating T Follicular Helper Cells in Multiple Sclerosis Patients.
    J Immunol. 2020 Feb 7; pii: ji1900955; doi: 10.4049/jimmunol.1900955; PMID: 32034063 
  • Salei et al.: The Kidney Contains Ontogenetically Distinct Dendritic Cell and Macrophage Subtypes throughout Development That Differ in Their Inflammatory Properties. 
    JASN. 2020 Jan 13; pii: ASN.2019040419; doi: 10.1681/ASN.2019040419; PMID: 31932472


  • Tavernier et al.: A human immune dysregulation syndrome characterized by severe hyperinflammation with a homozygous nonsense Roquin-1 mutation.
    Nature Commun. 2019 Dec; doi: 10.1038/s41467-019-12704-6; PMID: 31636267
  • Cossarizza, ... Richter, ... et al.: Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition).
    Eur J Immunol. 2019 Oct;49(10):1457-1973. doi: 10.1002/eji.201970107. PMID: 31633216
  • Winklmeier et al.: Identification of circulating MOG-specific B cells in patients with MOG antibodies.
    Neurol Neuroimmunol Neuroinflamm. 2019 Oct 2014;6:e625.; doi: 10.1212/NXI.0000000000000625; PMID: 31611268
  • Beltrán et al.: Early adaptive immune activation detected in monozygotic twins with prodromal multiple sclerosis. 
    J Clin Invest. 2019 Sep 30; doi: 10.1172/JCI128475; PMID: 31566584
  • Hassler et al.: Inventories of naive and tolerant mouse CD4 T cell repertoires reveal a hierarchy of deleted and diverted T cell receptors. 
    PNAS. 2019 Aug 26; doi: 10.1073/pnas.1907615116; PMID: 31451631
  • Cernilogar et al.: Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2. 
    Nucleic Acids Research. 2019 July 27; doi: 10.1093/nar/gkz627; PMID: 31350899
  • Bartolomé-Casado et al.: Resident memory CD8 T cells persist for years in human small intestine. 
    J Ex Med. 2019 Jul 23; doi: 10.1084/jem.20190414; PMID: 31337737
  • Rosenbaum et al.: Bcl10-controlled Malt1 par-acaspase activity is key for the immune suppressive function of regulatory T cells.
    Nat Commun 2019 May 28;10(1):2352. doi: 10.1038/s41467-019-10203-2; PMID: 31138793
  • Baumann et al.: Targeted removal of epigenetic barriers during transcriptional reprogramming. 
    Nature Commun. 2019 May 9; doi: 10.1038/s41467-019-10146-8.; PMID: 31073172
  • Souren et al.: DNA methylation signatures of monozygotic twins clinically discordant for multiple sclerosis.
    Nature Commun. 2019 May 7; DOI: 10.1038/s41467-019-09984-3; PMID: 31064978
  • Yamano et al.: Aire-expressing ILC3-like cells in the lymph node display potent APC features.
    J Ex Med. 2019 Mar; doi: 10.1084/jem.20181430; PMID: 30918005
  • Zwick et al.: Expression of the Phosphatase Ppef2 Controls Survival and Function of CD8+ Dendritic Cells.
    Front. Immunol. 2019 Feb; doi: 10.3389/fimmu.2019.00222; PMID: 30809231
  • Yamano et al.: B cells latently infected with murine gammaherpesvirus 68 (MHV‐68) are present in the mouse thymus – A step toward immune evasion?
    Eur J Immunol. 2019 Feb;49(2):351-352. doi: 10.1002/eji.201847886; PMID: 30488950
  • Matthias et al.: Sodium chloride is an ionic checkpoint for human Th2 cell responses and shapes the atopic skin microenvironment.
    Sci Transl Med. 2019 Feb;11(480). pii: eaau0683. doi: 10.1126/scitranslmed.aau0683. PMID: 30787167 
  • Ogrinc-Wagner et al.: Strain specific maturation of Dendritic cells and production of IL-1β controls CD40-driven colitis. 
    PLoS One. 2019 Jan 17;14(1):e0210998. doi: 10.1371/journal.pone.0210998. eCollection 2019; PMID: 30653608


  • Essig et al.: Roquin targets mRNAs in a 3′-UTR-specific manner by different modes of regulation.
    Nat Commun. 2018 Sep 19;9(1):3810. doi: 10.1038/s41467-018-06184-3; PMID: 30232334
  • Matthias et al.: Sodium chloride is an ionic checkpoint for human Th2 cell responses and shapes the atopic skin microenvironment.
    bioRxiv. 2018 Aug 13; doi: 10.1101/390393
  • Souren et al.: DNA methylation signatures of a large cohort monozygotic twins clinically discordant for multiple sclerosis.
    bioRxiv. 2018 Aug 1; doi: 10.1101/381822
  • Richter et al.: Transcriptional profiling reveals monocyte-related macrophages phenotypically resembling DC in human intestine. 
    Mucosal Immunol. 2018 Jul 23; doi: 10.1038/s41385-018-0060-1; PMID: 30038215
  • Spadaro et al.: Pathogenicity of human antibodies against myelin oligodendrocyte glycoprotein.
    Ann Neurol. 2018 Jul 16; doi: 10.1002/ana.25291; PMID: 30014603
  • Salvermoser et al.: Clec9a-Mediated Ablation of Conventional Dendritic Cells Suggests a Lymphoid Path to Generating Dendritic Cells In Vivo.
    Front Immunol. 2018 Apr 16; 9:699. doi: 10.3389/fimmu.2018.00699; PMID: 29713321
  • Ederle et al.: Nuclear egress of TDP-43 and FUS occurs independently of Exportin-1/CRM1.
    Sci Rep. 2018 May 4; 8(1):7084. doi: 10.1038/s41598-018-25007-5; PMID: 29728564
  • Rehage et al.: Binding of NUFIP2 to Roquin promotes recognition and regulation of ICOS mRNA. 
    Nat Commun2018 Jan 19; 9(1):299. doi: 10.1038/s41467-017-02582-1; PMID: 29352114


  • Essig et al.: Roquin Suppresses the PI3K-mTOR Signaling Pathway to Inhibit T Helper Cell Differentiation and Conversion of Treg to Tfr Cells.
    Immunity. 2017 Dec 19; 47(6):1067-1082.e12. doi: 10.1016/j.immuni.2017.11.008; PMID: 29246441
  • Montoya et al.: A distinct inhibitory function for miR-18a in Th17 cell differentiation. 
    J Immunol. 2017 July 15; 199 (2) 559-569. doi: 10.4049/jimmunol.1700170; PMID: 28607111
  • Zhou et al.: Antibodies inhibit transmission and aggregation of C9orf72 polyGA dipeptide repeat proteins.
    EMBO Mol Med. 2017 May 1; 9(5):687-702. doi: 10.15252/emmm.201607054; PMID: 28351931
  • Schuh et al.: Human Plasmacytoid Dendritic Cells Display and Shed B Cell Maturation Antigen upon TLR Engagement.
    J Immunol. 2017 Apr 15;198(8):3081-3088. doi: 10.4049/jimmunol.1601746. Epub 2017 Mar 10. PMID: 28283566
  • Barthels et al.: CD40-signalling abrogates induction of RORγt+ Treg cells by intestinal CD103+ DCs and causes fatal colitis. 
    Nat Commun. 2017 Mar 9;8:14715. doi: 10.1038/ncomms14715; PMID: 28276457
  • Ponce et al.: SIRPα-antibody fusion proteins stimulate phagocytosis and promote elimination of acute myeloid leukemia cells.
    Oncotarget. 2017 Feb 14; 8(7):11284-11301. doi: 10.18632/oncotarget.14500; PMID: 28061465


  • Dursun et al.: Continuous single cell imaging reveals sequential steps of plasmacytoid dendritic cell development from common dendritic cell progenitors.
    Sci Rep. 2016 Nov 28; 6:37462. doi: 10.1038/srep37462; PMID: 27892478
  • von Rohrscheidt et al.: Thymic CD4 T cell selection requires attenuation of March8-mediated MHCII turnover in cortical epithelial cells through CD83.
    J Exp Med. 2016 Aug 22; 213(9):1685-94. doi: 10.1084/jem.20160316; PMID: 27503071
  • Pasquarella et al.: Retrotransposon derepression leads to activation of the unfolded protein response and apoptosis in pro-B cells.
    Development. 2016 May 17; 143: 1788-1799; doi: 10.1242/dev.130203; PMID: 27013243
  • Meininger et al.: Alternative splicing of MALT1 controls signalling and activation of CD4(+) T cells.
    Nat Commun. 2016 Apr 12; 7:11292. doi: 10.1038/ncomms11292; PMID: 27068814


last updated: 2020-03-01